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Catalysis Clustering with GAN by Incorporating Domain Knowledge

  • University of Massachusetts Boston
  • Jiangnan University
  • University of Oslo
  • Harvard University

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

Clustering is an important unsupervised learning method with serious challenges when data is sparse and high-dimensional. Generated clusters are often evaluated with general measures, which may not be meaningful or useful for practical applications and domains. Using a distance metric, a clustering algorithm searches through the data space, groups close items into one cluster, and assigns far away samples to different clusters. In many real-world applications, the number of dimensions is high and data space becomes very sparse. Selection of a suitable distance metric is very difficult and becomes even harder when categorical data is involved. Moreover, existing distance metrics are mostly generic, and clusters created based on them will not necessarily make sense to domain-specific applications. One option to address these challenges is to integrate domain-defined rules and guidelines into the clustering process. In this work we propose a GAN-based approach called Catalysis Clustering to incorporate domain knowledge into the clustering process. With GANs we generate catalysts, which are special synthetic points drawn from the original data distribution and verified to improve clustering quality when measured by a domain-specific metric. We then perform clustering analysis using both catalysts and real data. Final clusters are produced after catalyst points are removed. Experiments on two challenging real-world datasets clearly show that our approach is effective and can generate clusters that are meaningful and useful for real-world applications.

Original languageEnglish
Title of host publicationKDD 2020 - Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining
PublisherAssociation for Computing Machinery
Pages1344-1352
Number of pages9
ISBN (Electronic)9781450379984
DOIs
StatePublished - Aug 23 2020
Event26th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD 2020 - Virtual, Online, United States
Duration: Aug 23 2020 → Aug 27 2020

Publication series

NameProceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining

Conference

Conference26th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD 2020
Country/TerritoryUnited States
CityVirtual, Online
Period8/23/20 → 8/27/20

ASJC Scopus Subject Areas

  • Software
  • Information Systems

Keywords

  • cancer subtyping
  • clustering evaluation
  • domain-informed clustering
  • GAN

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