Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics

Daniel L. Villeneuve; Mackenzie Nash; Adam Biales; Kendra Bush; Garrett Evensen; Logan Everett; Jonathan Haselman; Monique Hazemi; Michelle Le; Helen Poynton; Bruce Seligmann; Leah Wehmas; Joanne Yeakley; Kevin Flynn

doi:10.1016/j.yrtph.2025.105898

Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics

Daniel L. Villeneuve
, Mackenzie Nash
, Adam Biales
, Kendra Bush
, Garrett Evensen
, Logan Everett
, Jonathan Haselman
, Monique Hazemi
, Michelle Le
, Helen Poynton
, Bruce Seligmann
, Leah Wehmas
, Joanne Yeakley
, Kevin Flynn

SFE - Dean's Office

Research output: Contribution to journal › Article › peer-review

Original language	English
Article number	105898
Journal	Regulatory Toxicology and Pharmacology
Volume	162
DOIs	https://doi.org/10.1016/j.yrtph.2025.105898
State	Published - Nov 2025

ASJC Scopus Subject Areas

Toxicology

Keywords

Computational toxicology
Ecotoxicology
Federal prize competition
High-throughput transcriptomics
New approach methods

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10.1016/j.yrtph.2025.105898

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Villeneuve, D. L., Nash, M., Biales, A., Bush, K., Evensen, G., Everett, L., Haselman, J., Hazemi, M., Le, M., Poynton, H., Seligmann, B., Wehmas, L., Yeakley, J., & Flynn, K. (2025). Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics. Regulatory Toxicology and Pharmacology, 162, Article 105898. https://doi.org/10.1016/j.yrtph.2025.105898

Villeneuve, DL, Nash, M, Biales, A, Bush, K, Evensen, G, Everett, L, Haselman, J, Hazemi, M, Le, M, Poynton, H, Seligmann, B, Wehmas, L, Yeakley, J & Flynn, K 2025, 'Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics', Regulatory Toxicology and Pharmacology, vol. 162, 105898. https://doi.org/10.1016/j.yrtph.2025.105898

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author = "Villeneuve, \{Daniel L.\} and Mackenzie Nash and Adam Biales and Kendra Bush and Garrett Evensen and Logan Everett and Jonathan Haselman and Monique Hazemi and Michelle Le and Helen Poynton and Bruce Seligmann and Leah Wehmas and Joanne Yeakley and Kevin Flynn",

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year = "2025",

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doi = "10.1016/j.yrtph.2025.105898",

language = "English",

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T1 - Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics

AU - Villeneuve, Daniel L.

AU - Nash, Mackenzie

AU - Biales, Adam

AU - Bush, Kendra

AU - Evensen, Garrett

AU - Everett, Logan

AU - Haselman, Jonathan

AU - Hazemi, Monique

AU - Le, Michelle

AU - Poynton, Helen

AU - Seligmann, Bruce

AU - Wehmas, Leah

AU - Yeakley, Joanne

AU - Flynn, Kevin

PY - 2025/11

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KW - Computational toxicology

KW - Ecotoxicology

KW - Federal prize competition

KW - High-throughput transcriptomics

KW - New approach methods

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UR - https://www.scopus.com/pages/publications/105009060767#tab=citedBy

U2 - 10.1016/j.yrtph.2025.105898

DO - 10.1016/j.yrtph.2025.105898

M3 - Article

C2 - 40571240

AN - SCOPUS:105009060767

SN - 0273-2300

VL - 162

JO - Regulatory Toxicology and Pharmacology

JF - Regulatory Toxicology and Pharmacology

M1 - 105898

ER -

Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics

ASJC Scopus Subject Areas

Keywords

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