TIDE: Inter-chromosomal translocation and insertion detection using embeddings

Rosarme Vetro; Roshanak Farhoodi; Rohith Kotla; Nurit Haspel; David Weisman; Jennifer Rosen; Dan Simovici

doi:10.1109/BigData.2014.7004395

TIDE: Inter-chromosomal translocation and insertion detection using embeddings

Rosarme Vetro
, Roshanak Farhoodi
, Rohith Kotla
, Nurit Haspel
, David Weisman
, Jennifer Rosen
, Dan Simovici

Computer Science

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Original language	English
Title of host publication	Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014
Editors	Jimmy Lin, Jian Pei, Xiaohua Tony Hu, Wo Chang, Raghunath Nambiar, Charu Aggarwal, Nick Cercone, Vasant Honavar, Jun Huan, Bamshad Mobasher, Saumyadipta Pyne
Publisher	Institute of Electrical and Electronics Engineers Inc.
Pages	64-70
Number of pages	7
ISBN (Electronic)	9781479956654
DOIs	https://doi.org/10.1109/BigData.2014.7004395
State	Published - 2014
Event	2nd IEEE International Conference on Big Data, IEEE Big Data 2014 - Washington, United States Duration: Oct 27 2014 → Oct 30 2014

Publication series

Name	Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014

Conference

Conference	2nd IEEE International Conference on Big Data, IEEE Big Data 2014
Country/Territory	United States
City	Washington
Period	10/27/14 → 10/30/14

ASJC Scopus Subject Areas

Artificial Intelligence
Information Systems

Keywords

Insertion
Locality sensitive hashing (LSH)
Next-generation sequencing (NGS)
Structural variations (SVs)
Translocation

Access to Document

10.1109/BigData.2014.7004395

Cite this

Vetro, R., Farhoodi, R., Kotla, R., Haspel, N., Weisman, D., Rosen, J., & Simovici, D. (2014). TIDE: Inter-chromosomal translocation and insertion detection using embeddings. In J. Lin, J. Pei, X. T. Hu, W. Chang, R. Nambiar, C. Aggarwal, N. Cercone, V. Honavar, J. Huan, B. Mobasher, & S. Pyne (Eds.), Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014 (pp. 64-70). Article 7004395 (Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/BigData.2014.7004395

TIDE: Inter-chromosomal translocation and insertion detection using embeddings. / Vetro, Rosarme; Farhoodi, Roshanak; Kotla, Rohith et al.
Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014. ed. / Jimmy Lin; Jian Pei; Xiaohua Tony Hu; Wo Chang; Raghunath Nambiar; Charu Aggarwal; Nick Cercone; Vasant Honavar; Jun Huan; Bamshad Mobasher; Saumyadipta Pyne. Institute of Electrical and Electronics Engineers Inc., 2014. p. 64-70 7004395 (Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Vetro, R, Farhoodi, R, Kotla, R, Haspel, N, Weisman, D, Rosen, J & Simovici, D 2014, TIDE: Inter-chromosomal translocation and insertion detection using embeddings. in J Lin, J Pei, XT Hu, W Chang, R Nambiar, C Aggarwal, N Cercone, V Honavar, J Huan, B Mobasher & S Pyne (eds), Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014., 7004395, Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014, Institute of Electrical and Electronics Engineers Inc., pp. 64-70, 2nd IEEE International Conference on Big Data, IEEE Big Data 2014, Washington, United States, 10/27/14. https://doi.org/10.1109/BigData.2014.7004395

Vetro R, Farhoodi R, Kotla R, Haspel N, Weisman D, Rosen J et al. TIDE: Inter-chromosomal translocation and insertion detection using embeddings. In Lin J, Pei J, Hu XT, Chang W, Nambiar R, Aggarwal C, Cercone N, Honavar V, Huan J, Mobasher B, Pyne S, editors, Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014. Institute of Electrical and Electronics Engineers Inc. 2014. p. 64-70. 7004395. (Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014). doi: 10.1109/BigData.2014.7004395

Vetro, Rosarme ; Farhoodi, Roshanak ; Kotla, Rohith et al. / TIDE : Inter-chromosomal translocation and insertion detection using embeddings. Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014. editor / Jimmy Lin ; Jian Pei ; Xiaohua Tony Hu ; Wo Chang ; Raghunath Nambiar ; Charu Aggarwal ; Nick Cercone ; Vasant Honavar ; Jun Huan ; Bamshad Mobasher ; Saumyadipta Pyne. Institute of Electrical and Electronics Engineers Inc., 2014. pp. 64-70 (Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014).

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AU - Rosen, Jennifer

AU - Simovici, Dan

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ER -

TIDE: Inter-chromosomal translocation and insertion detection using embeddings

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ASJC Scopus Subject Areas

Keywords

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